Hey Stripbait, All the right guys have responded. I had similar issues with my system, but in the end I did find a bad ground connection right on one of the batteries. The copper was completed corroded under the heatshrink, which I wouldn't expect in a 2013, mine is 2003.
I use a bunch of "house "power on the hook so this is what I did over 2 years:
Added BEP cluster switch
Added an additional house battery(now I have a starting battery (Gp25) and 2 deepcycles (Gp27)
Added a shore power connection
Added a guest 2 bank charger for the deep cycles
Installed the original Perko switch (1,2,both) between the house batteries and the BEP cluster. That gives me the option to use either 1, 2, or both house batteries. But this also allows me to shut them off so that the guest charger can charge them independently when the boat isn't in use.
The cluster switch is awesome, my starting battery is always fully charged, and now I have a backup house battery that is always fully charged. Only thing I need now is the small Honda generator that I'll connect directly to the Shore Power connection for overnights.